PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2AS_3B7BE6FDC.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 220aa    MW: 24528.4 Da    PI: 7.4244
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2AS_3B7BE6FDC.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.9e-101560550
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                           kr++r   NR +A rs +RK  +i eLe+kv +L++e ++L  +l 
  Traes_2AS_3B7BE6FDC.2 15 KRAKRILANRQSAARSKERKARYITELERKVHTLQTEATTLSAQLT 60
                           9****************************************98775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-151175IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-81265No hitNo description
PROSITE profilePS5021710.4961376IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.2E-111566No hitNo description
PfamPF001704.4E-91559IPR004827Basic-leucine zipper domain
CDDcd147039.68E-221665No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MSSEQLSELA SVDPKRAKRI LANRQSAARS KERKARYITE LERKVHTLQT EATTLSAQLT  60
LFQRDTTGLS AENTELKIRL QAMEQQAQLR DALNNTLKQE LERLKIATGE MTKPDEAYNT  120
GMHHVPYNPS FFQLSEQHTP QHHSSVHQLP SQFQPPHPNV PSHQMLSHPN TFPDMMQQDS  180
LGRFQGLDIG KGSVAVKLEA DAAAKSEGSS ISAGESNSTF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3749000.0AK374900.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3079L07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003562448.11e-133PREDICTED: transcription factor RF2b-like
RefseqXP_006658967.21e-133PREDICTED: transcription factor RF2b-like
SwissprotQ6S4P41e-103RF2B_ORYSJ; Transcription factor RF2b
TrEMBLW5B0R71e-162W5B0R7_WHEAT; Uncharacterized protein
STRINGMLOC_44311.11e-153(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26833683
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.13e-67bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]